@gmod/genomefeaturecomponentdeprecated

Provides SVG View for Genome Features rendered with the Apollo Track Web Service from JBrowse data React Component

Usage no npm install needed!

<script type="module">
  import gmodGenomefeaturecomponent from 'https://cdn.skypack.dev/@gmod/genomefeaturecomponent';
</script>

README

GenomeFeatureComponent

Travis npm package Coveralls

Describe GenomeFeatureComponent here.

Instructions

Make sure you have node 8 or better)

npm install

npm start

View at http://localhost:3000.

Works by accessing data from an Apollo server.

E.g., http://someserver.org/apollo/track/Honeybee/Official%20Gene%20Set%20v3.2/Group1.1/GB42168-RA.json

[{"strand":1,"children":[[{"phase":0,"strand":1,"fmin":329332,"type":"CDS","fmax":329459},{"phase":2,"strand":1,"fmin":329849,"type":"CDS","fmax":330082},{"phase":0,"strand":1,"fmin":330165,"type":"CDS","fmax":330301},{"phase":2,"strand":1,"fmin":330375,"type":"CDS","fmax":330416},{"strand":1,"fmin":329332,"type":"exon","fmax":329459},{"strand":1,"fmin":329849,"type":"exon","fmax":330082},{"strand":1,"fmin":330165,"type":"exon","fmax":330301},{"strand":1,"fmin":330375,"type":"exon","fmax":330416}]],"name":"GB42168-RA","id":"http://demo.genomearchitect.org/Apollo2/track/Honeybee/Official Gene Set v3.2/Group1.1/GB42168-RA.json","fmin":329332,"type":"mRNA","fmax":330416,"selected":true}]