htseq-js

A TypeScript implementation of a BAM file reader for dealing with genomic sequencing data.

Usage no npm install needed!

<script type="module">
  import htseqJs from 'https://cdn.skypack.dev/htseq-js';
</script>

README

htseq-js

A library for reading BAM files for sequence alignments. I could not find a decent implementation of a reader so I decided to write one from scratch in TypeScript as a way to understand the BAM file specification and create a clean, documented implementation which might serve as a learning reference for other projects.

This is an early alpha version so check for updates as I fix things.